Description

Creates a sequence dictionary for a reference sequence

Input

name:type
description
pattern

meta

:map

Groovy Map containing reference information e.g. [ id:‘genome’ ]

fasta

:file

Input fasta file

*.{fasta,fa}

Output

name:type
description
pattern

dict

meta

:file

gatk dictionary file

*.{dict}

*.dict

:file

gatk dictionary file

*.{dict}

versions

versions.yml

:file

File containing software versions

versions.yml

Tools

gatk
Apache-2.0

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size.